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@wejlab

W. Evan Johnson Lab

This is the main GitHub home for the research and software projects from Evan Johnson's Lab

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  1. animalcules animalcules Public

    R shiny app for interactive microbiome analysis

    R 56 22

  2. MetaScope MetaScope Public

    An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)

    R 23 8

  3. TBSignatureProfiler TBSignatureProfiler Public

    Profile RNA-seq data using published TB gene signatures

    R 14 13

  4. BatchQC BatchQC Public

    Batch Effects Quality Control Software

    R 11 13

  5. ASSIGN ASSIGN Public

    Adaptive Signature Selection and InteGratioN

    R 2

  6. PathoStat PathoStat Public

    Forked from mani2012/PathoStat

    The purpose of this package is to perform Statistical Analysis on the PathoScope generated reports files.

    R 2

Repositories

Showing 10 of 23 repositories
  • MetaScope Public

    An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)

    wejlab/MetaScope’s past year of commit activity
    R 23 GPL-3.0 8 2 0 Updated Mar 12, 2026
  • ComBatSuite Public

    ComBat suite of tools built upon the original sva framework

    wejlab/ComBatSuite’s past year of commit activity
    R 0 3 0 0 Updated Feb 10, 2026
  • BatchQC Public

    Batch Effects Quality Control Software

    wejlab/BatchQC’s past year of commit activity
    R 11 13 8 0 Updated Feb 10, 2026
  • 2026_Spring_FDS Public Forked from wevanjohnson/2026_Spring_FDS

    Course materials for the Spring 2026 instance of Fundamental of Data Science (GSND 5345) at the Rutgers University School of Graduate Studies

    wejlab/2026_Spring_FDS’s past year of commit activity
    0 38 0 0 Updated Feb 2, 2026
  • jlabwiki Public

    A wiki of knowledge for Johnson Lab members

    wejlab/jlabwiki’s past year of commit activity
    0 1 0 0 Updated Jan 12, 2026
  • TBSignatureProfiler Public

    Profile RNA-seq data using published TB gene signatures

    wejlab/TBSignatureProfiler’s past year of commit activity
    R 14 13 2 0 Updated Dec 15, 2025
  • PGRR-supplementary Public

    Supplementary Material for PGRR Paper

    wejlab/PGRR-supplementary’s past year of commit activity
    0 0 0 0 Updated Sep 23, 2025
  • LegATo Public

    An R-based Longitudinal mEtaGenomic Analysis Toolkit for microbiome data

    wejlab/LegATo’s past year of commit activity
    R 2 1 0 0 Updated Aug 25, 2025
  • PGRR Public
    wejlab/PGRR’s past year of commit activity
    0 CC0-1.0 1 0 0 Updated Jun 19, 2025
  • wejlab.github.io Public

    Repository for wejlab.github.io

    wejlab/wejlab.github.io’s past year of commit activity
    0 0 0 0 Updated Jun 16, 2025
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