Skip to content

Folders and files

NameName
Last commit message
Last commit date

Latest commit

ย 

History

48 Commits
ย 
ย 
ย 
ย 
ย 
ย 
ย 
ย 
ย 
ย 

Repository files navigation

DOI

Welcome! Here, we present our study of allergic asthma in the human airway.

Read the paper ๐ŸŽ“

Please read and cite our original research article:

Explore the data ๐Ÿ”ฌ

Cell Clusters

Metadata variables and gene expression in two-dimensional embeddings.

3 cell lineages:

  • Epithelial cells, Mononuclear phagocytes, T cellslls

๐Ÿ‘‰ View Cell Clusters

Gene Contrasts

Differential expression statistics for all genes across:

  • 2 contrasts (condition Ag vs Bln, group AA vs AC)

๐Ÿ‘‰ View Gene Contrasts

Read the source code ๐Ÿ’ป

This repository includes two folders:

deg_table/

  • The differentially expressed gene tables.

figure_scripts/

  • The source code for creating the figures that appear in the manuscript.

Download the data ๐Ÿ’พ

The raw and processed scRNA-seq gene expression files are available at NCBI GEO GSE193816.

About

No description, website, or topics provided.

Resources

Stars

4 stars

Watchers

2 watching

Forks

Releases

Packages

Contributors

Languages