Repositories list

• ngs_scripts

  Public
  R

  •00 forks•22 stars•66 issues•00 pull requests•Updated Jul 23, 2026Jul 23, 2026

• hcvtyper

  Public
  Assemble Hepatitis C virus genomes from Illumina enrichment sequencing

  virussurveillancehcv+ 3

  virussurveillancehcvnextflow-pipelineantiviral-resistancehepatitis-c-virus

  Nextflow

  •

  MIT License

  •00 forks•33 stars•1414 issues•00 pull requests•Updated Jul 5, 2026Jul 5, 2026

• modelling

  Public
  Website for the infectious disease modelling team at FHI

  HTML

  •

  MIT License

  •22 forks•00 stars•00 issues•00 pull requests•Updated Jun 26, 2026Jun 26, 2026

• Fhi.Frontend.Demo

  Public
  TypeScript

  •

  MIT License

  •11 fork•22 stars•2929 issues•11 pull request•Updated Jun 22, 2026Jun 22, 2026

• LMDI

  Public
  GLSL

  •

  Other

  •00 forks•22 stars•55 issues•00 pull requests•Updated Jun 12, 2026Jun 12, 2026

• Fhi.Slash.Public

  Public
  C#

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 28, 2026May 28, 2026

• START

  Public
  Analysis of DNA methylation in ART trios

  HTML

  •11 fork•33 stars•00 issues•00 pull requests•Updated May 22, 2026May 22, 2026

• covid19_economic_evaluation

  Public
  R

  •00 forks•11 star•00 issues•00 pull requests•Updated Apr 24, 2026Apr 24, 2026

• .github

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Dec 4, 2025Dec 4, 2025

• Fhi.Statistikk.OpenAPI

  Public
  C#

  •22 forks•55 stars•00 issues•00 pull requests•Updated Dec 1, 2025Dec 1, 2025

• FHI_Statistikk_NGS

  Public
  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 27, 2025Oct 27, 2025

• KppParser

  Public
  Konverterer KPP-filer til XML-meldingen som skal sendes til Folkehelseinstituttet

  C#

  •22 forks•22 stars•55 issues•11 pull request•Updated Sep 2, 2025Sep 2, 2025

• Fhi.Frontend.Style

  Public
  SCSS

  •22 forks•22 stars•00 issues•00 pull requests•Updated Jun 30, 2025Jun 30, 2025

• FHI_SC2_Pipeline_Nanopore

  Public
  Bioinformatic pipeline for SARS-CoV-2 sequence analysis

  R

  •11 fork•00 stars•00 issues•00 pull requests•Updated May 7, 2025May 7, 2025

• Fhi.Frontend.ReactComponents

  Public
  TypeScript

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 11, 2025Mar 11, 2025

• SC2_drug_resistance

  Public
  Analysis of Sars-Cov-2 drug resistance mutations from the Stanford database

  R

  •00 forks•00 stars•44 issues•00 pull requests•Updated Mar 6, 2025Mar 6, 2025

• DMRichR-FAIRification

  Public
  Archiving

  R

  •

  GNU Affero General Public License v3.0

  •00 forks•22 stars•00 issues•00 pull requests•Updated Feb 4, 2025Feb 4, 2025

• Fhi.ReverseProxyMiddleware

  Public
  Handles reverse proxy middleware

  C#

  •

  MIT License

  •00 forks•00 stars•00 issues•22 pull requests•Updated Jan 20, 2025Jan 20, 2025

• Slash

  Public
  Sikker lagring av sensitive helsedata (SLASH)

  00 forks•00 stars•00 issues•00 pull requests•Updated Jan 9, 2025Jan 9, 2025

• FIDA

  Public
  00 forks•22 stars•00 issues•00 pull requests•Updated Jan 9, 2025Jan 9, 2025

• 2D_vs_3D_2024

  Public
  2D_vs_3D_2024

  R

  •

  GNU General Public License v3.0

  •00 forks•11 star•00 issues•00 pull requests•Updated Dec 20, 2024Dec 20, 2024

• ECDC.Handhygiene

  Public
  C#

  •

  MIT License

  •11 fork•00 stars•00 issues•11 pull request•Updated Dec 4, 2024Dec 4, 2024

• TOP

  Public
  Bacterial swiss-army-knife pipeline for NGS data

  Python

  •11 fork•00 stars•00 issues•00 pull requests•Updated Oct 1, 2024Oct 1, 2024

• covid19_trend

  Public
  R

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 30, 2024Sep 30, 2024

• 2024-facemask-trial-bmj

  Public
  The personal protective effect of wearing surgical face masks in public spaces on self-reported respiratory symptoms in adults: a pragmatic randomised superiori…

  R

  •00 forks•22 stars•00 issues•00 pull requests•Updated May 23, 2024May 23, 2024

• AOPnetworkFinder_v1

  Public archive
  Python

  •

  GNU Affero General Public License v3.0

  •22 forks•33 stars•00 issues•00 pull requests•Updated May 4, 2024May 4, 2024

• hepatitis_C_model

  Public
  Model of hepatitis C transmission in Norway used in Whittaker, Midtbø and Kløvstad (https://doi.org/10.1093/infdis/jiae147, 2024)

  infectious-disease-modelshepatitis-cpwid

  infectious-disease-modelshepatitis-cpwid

  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 3, 2024Apr 3, 2024

• mpox_surveillance

  Public
  R

  •00 forks•11 star•00 issues•00 pull requests•Updated Mar 22, 2024Mar 22, 2024

• FHI_SC2_Pipeline_Illumina

  Public
  Bioinformatic pipeline for SARS-CoV-2 sequence analysis

  R

  •00 forks•11 star•00 issues•00 pull requests•Updated Mar 20, 2024Mar 20, 2024

• sc2_seq_analysis

  Public
  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 6, 2024Mar 6, 2024