Repositories list

• geome-db

  Public
  Java

  •

  MIT License

  •11 fork•22 stars•1212 issues•00 pull requests•Updated Jul 24, 2026Jul 24, 2026

• geome-ui

  Public
  TypeScript

  •55 forks•44 stars•8484 issues•99 pull requests•Updated Jul 17, 2026Jul 17, 2026

• biscicol-server

  Public
  Service endpoint code for searching PPO elasticsearch data

  JavaScript

  •11 fork•22 stars•33 issues•1313 pull requests•Updated Jun 30, 2026Jun 30, 2026

• geome-configurations

  Public
  Manage project configurations for geome

  Vue

  •00 forks•11 star•22 issues•00 pull requests•Updated Apr 11, 2026Apr 11, 2026

• merge_lims

  Public
  A repository for working on our LIMS merge project

  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 28, 2026Feb 28, 2026

• geome-governance

  Public
  00 forks•00 stars•77 issues•00 pull requests•Updated Feb 21, 2026Feb 21, 2026

• geome-installation

  Public
  installation and deployment instructions for GEOME and BCID

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 5, 2025Nov 5, 2025

• biocode-lims

  Public
  The Biocode LIMS plugin integrates Geneious with your lab workflow, allowing you to track processes through tissue sample, extraction, PCR, sequencing and assem…

  Java

  •

  BSD 3-Clause "New" or "Revised" License

  •00 forks•1212 stars•5454 issues•00 pull requests•Updated Oct 30, 2025Oct 30, 2025

• arctos_interface

  Public
  Interface for arctos

  JavaScript

  •11 fork•00 stars•11 issue•00 pull requests•Updated Sep 2, 2025Sep 2, 2025

• arctos_data

  Public
  Python

  •00 forks•00 stars•33 issues•00 pull requests•Updated Sep 2, 2025Sep 2, 2025

• ppo-data-interface

  Public
  Visual global plant phenology

  plantphenology

  plantphenology

  JavaScript

  •66 forks•00 stars•55 issues•00 pull requests•Updated May 6, 2025May 6, 2025

• biocode_website

  Public
  Code to build the Biocode website

  HTML

  •11 fork•00 stars•00 issues•11 pull request•Updated Apr 28, 2025Apr 28, 2025

• bcid

  Public
  Biocode Commons Identifiers

  Java

  •00 forks•22 stars•22 issues•00 pull requests•Updated Mar 13, 2025Mar 13, 2025

• localcontexts_json

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 16, 2024Oct 16, 2024

• localcontexts_db

  Public archive
  Local contexts back-end

  Python

  •

  Other

  •22 forks•66 stars•00 issues•00 pull requests•Updated Jan 25, 2024Jan 25, 2024

• geome-scripts

  Public
  A place for monitoring scripts for GEOME

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 6, 2023Dec 6, 2023

• ppo-data-pipeline

  Public
  Python

  •00 forks•44 stars•22 issues•99 pull requests•Updated Oct 16, 2023Oct 16, 2023

• ontology-data-pipeline

  Public
  A high-throughput ontology-based pipeline for data integration

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •66 forks•1616 stars•88 issues•1212 pull requests•Updated May 17, 2023May 17, 2023

• geomedb

  Public
  A set of R scripts for accessing and working with FIMS data from R

  R

  •22 forks•22 stars•22 issues•00 pull requests•Updated Nov 12, 2022Nov 12, 2022

• trait-viz

  Public
  Visualize trait data

  JavaScript

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 10, 2021Aug 10, 2021

• query_fetcher

  Public
  Fetch data from a named graph using a SPARQL query you pass in

  Java

  •00 forks•11 star•00 issues•00 pull requests•Updated Aug 7, 2021Aug 7, 2021

• documentation

  Public
  Issues and Documentation on the FIMS family of services

  00 forks•00 stars•00 issues•00 pull requests•Updated Jul 29, 2021Jul 29, 2021

• elk_pipeline

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 23, 2021Jul 23, 2021

• ror-parser

  Public archive
  Python script to parse ROR JSON file

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 26, 2021May 26, 2021

• localcontexts_ui

  Public
  User Interface for local contexts interface

  00 forks•11 star•44 issues•00 pull requests•Updated May 12, 2021May 12, 2021

• biocode-fims-tissues

  Public
  Java

  •00 forks•11 star•00 issues•00 pull requests•Updated Jun 19, 2020Jun 19, 2020

• biocode-fims-commons

  Public
  Biocode Field Information Management System

  Java

  •00 forks•33 stars•1515 issues•00 pull requests•Updated Apr 27, 2020Apr 27, 2020

• biocode-fims-photos

  Public
  Java

  •00 forks•00 stars•22 issues•00 pull requests•Updated Jan 27, 2020Jan 27, 2020

• biocode-fims-evolution

  Public
  Plugin to integrate with Evolution API

  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 7, 2019Nov 7, 2019

• biscicol-fims

  Public
  Biocode-Fims app at www.biscicol.org

  JavaScript

  •00 forks•11 star•99 issues•00 pull requests•Updated Feb 28, 2019Feb 28, 2019