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Writing Paper (JOSS) #188
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0fbbc8b
added barebones paper.md
JensKrumsieck e9e69a2
Merge branch 'main' into paper/joss
JensKrumsieck 60a03ef
Merge branch 'main' into paper/joss
JensKrumsieck fa4898f
summary
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JensKrumsieck a6d9660
added dfg
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added bib file
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comma
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fix path
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fix
JensKrumsieck e6fd308
yml fix
JensKrumsieck 7614212
Merge branch 'main' into paper/joss
JensKrumsieck 8f2df5b
minor fixes
JensKrumsieck df52301
added placeholder text
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first paragraph SoN
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added some content
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add more content
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small changes to test how figures work in pdf
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added paragrah
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added rors
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added signs
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add fig
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Merge branch 'main' into paper/joss
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reboot process, added neccessary information
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,25 @@ | ||
| name: Draft PDF | ||
| on: | ||
| push: | ||
| branches: ["paper/joss"] | ||
| paths: | ||
| - paper/** | ||
| - .github/workflows/draft-pdf.yml | ||
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| jobs: | ||
| paper: | ||
| runs-on: ubuntu-latest | ||
| name: Paper Draft | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| - name: Build draft PDF | ||
| uses: openjournals/openjournals-draft-action@master | ||
| with: | ||
| journal: joss | ||
| paper-path: paper.md | ||
| - name: Upload | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: paper | ||
| path: paper.pdf | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,3 @@ | ||
| @article{wörstbröt, | ||
| title = delete me! | ||
| } |
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,58 @@ | ||
| --- | ||
| title: 'SciWin-Client: something subtitle' | ||
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| tags: | ||
| - CWL | ||
| - workflow | ||
| - FAIRagro | ||
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| authors: | ||
| - name: Jens Krumsieck | ||
| orcid: 0000-0001-6242-5846 | ||
| affiliation: 1 | ||
| - name: Antonia Leidel | ||
| orcid: 0009-0007-1765-0527 | ||
| affiliation: 2 | ||
| - name: Harald von Waldow | ||
| orcid: ... | ||
| affiliation: 1 | ||
| - name: Patrick König | ||
| orcid: 0000-0002-8948-6793 | ||
| affiliation: 3 | ||
| - name: Xaver Stiensmeier | ||
| orcid: 0009-0005-3274-122X | ||
| affiliation: 4 | ||
| - name: Florian Hoedt | ||
| orcid: 0000-0002-6068-1659 | ||
| affiliation: 5 | ||
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| affiliations: | ||
| - name: Johann Heinrich von Thünen-Institute, Braunschweig, Germany | ||
| index: 1 | ||
| - name: Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany | ||
| index: 2 | ||
| - name: Helmholtz Centre for Infection Research, Braunschweig, Germany | ||
| index: 3 | ||
| - name: University Bielefeld, Bielefeld, Germany | ||
| index: 4 | ||
| - name: PowerCo ?? | ||
| index: 5 | ||
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| date: XX XXXX 202X | ||
| bibliography: paper.bib | ||
| --- | ||
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| # Summary | ||
| SciWIn-Client is a command-line tool developed as part of FAIRagro's Scientific Workflow Infrastructure (SciWIn). It is designed to streamline the creation, execution and management of reproducible computational Workflows using the Common Workflow Language (CWL). | ||
| SciWIn-Client allows researchers to create and modify CWL CommandLineTools and workflows with minimal amount of work. It supports local and remote workflow execution within containerized environments enabling consitent results across different systems. | ||
| By integrating with Git it promotes transparent and collaborative workflow development helping researchers to share their work in a reproducible and substainable way. | ||
| ... | ||
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| # Statement of Need | ||
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| # ...? | ||
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| # Acknowledgements | ||
| We gratefully acknowledge the financial support of the German Research Foundation (DFG) – project number 501899475. | ||
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| # References |
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