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Problem with inference of parameters

Status: Open.

#288 In catavallejos/BASiCS;

· PieterVerhagen opened on Apr 9, 2026

Add data input check to ensure expression counts are integers

Status: Open.

#280 In catavallejos/BASiCS;

· catavallejos opened on Sep 21, 2023

comparing single cell and single nuclei datasets

Status: Open.

#279 In catavallejos/BASiCS;

· binyaminZ opened on Dec 29, 2022

Edit Summary so that merged tables can be provided

Status: Open.

#272 In catavallejos/BASiCS;

· catavallejos opened on Nov 26, 2022

BASiCS_DenoisedCounts requires no further data normalisation?

Status: Open.

#264 In catavallejos/BASiCS;

· binyaminZ opened on Sep 5, 2022

Intuition for noise parameter

Status: Open.

#237 In catavallejos/BASiCS;

· binyaminZ opened on May 25, 2022

Theta doesn't converge

Status: Open.

#235 In catavallejos/BASiCS;

· binyaminZ opened on Mar 25, 2022

Improve error documentation in BASiCS_PlotVG

Status: Open.

#221 In catavallejos/BASiCS;

· catavallejos opened on Dec 17, 2020

EB prior for phi?

Status: Open.

#215 In catavallejos/BASiCS;

· catavallejos opened on Oct 30, 2020

Cumulative plots for diagnostics?

Status: Open.

#214 In catavallejos/BASiCS;

· catavallejos opened on Oct 26, 2020

Threads needs to be documented in BASiCS_MCCM

Status: Open.

#207 In catavallejos/BASiCS;

· catavallejos opened on Sep 30, 2020

Read BatchInfo directly from colData ?

Status: Open.

#206 In catavallejos/BASiCS;

· catavallejos opened on Sep 29, 2020