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2 changes: 1 addition & 1 deletion scripts/filter_samples_from_otu_table.py
Original file line number Diff line number Diff line change
Expand Up @@ -62,7 +62,7 @@
help='Path to file listing sample ids to keep. Valid formats for the file are: 1) any white space, newline, or tab delimited list of samples, 2) a mapping file with samples in the first column [default: %default]'),
make_option('-s',
'--valid_states', type='string',
help="string describing valid states (e.g. 'Treatment:Fasting') [default: %default]"),
help="string describing valid states (e.g. 'Treatment:Fasting' or 'Treatment:*,!Control;Age:19,20,21') [default: %default]"),
make_option('-n',
'--min_count',
type='int',
Expand Down