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Clarification of MOFA's internal qc (specifically factor ~ sample expression correlation)

Status: Open.

#204 In bioFAM/MOFA2;

· hendhr opened on Jun 5, 2026

MOFA + Mefisto stuck on Optimising sigma node

Status: Open.

#202 In bioFAM/MOFA2;

· komalsrathi opened on May 22, 2026

Mefisto error - operands could not be broadcast together with shapes (40,1) (35,1)

Status: Open.

#196 In bioFAM/MOFA2;

· deniseduma opened on Feb 28, 2026

MEFISTO crash when model_groups=TRUE and warping disabled (shared time axis across groups)

Status: Open.

#195 In bioFAM/MOFA2;

· stefanom64 opened on Feb 25, 2026

checkForRemoteErrors

Status: Open.

#184 In bioFAM/MOFA2;

· wangcongjian opened on Sep 19, 2025

Clustering features

Status: Open.

#183 In bioFAM/MOFA2;

· drosop opened on Jun 26, 2025

run_enrichment issue

Status: Open.

#181 In bioFAM/MOFA2;

· 5959595995 opened on May 17, 2025

'ascii' codec can't decode byte 0xce in position 2: ordinal not in range(128)

Status: Open.

#177 In bioFAM/MOFA2;

· SimonE1220 opened on Mar 13, 2025

R crashes when running run_mofa

Status: Open.

#173 In bioFAM/MOFA2;

· elffairy90 opened on Jan 9, 2025

Uncertainty Estimates of trained MOFA model

Status: Open.

#169 In bioFAM/MOFA2;

· phlicht opened on Oct 19, 2024

incorrect plot margins in correlate_factors_with_covariates

Status: Open.

#168 In bioFAM/MOFA2;

· cleiti opened on Sep 19, 2024

Questions about using MOFA with bulk RNA-seq deconvolution results and uneven view sizes

Status: Open.

#167 In bioFAM/MOFA2;

· doctorfaraday520 opened on Sep 15, 2024