HH-suite-database

#安装work、work2中的依赖项，路径请自行修改 mkdir /kangyufei/work/MMseqs2/build cd /kangyufei/work/MMseqs2/build chmod a+x ../cmake/checkshell.sh cmake -DCMAKE_BUILD_TYPE=RELEASE -DCMAKE_INSTALL_PREFIX=. .. make make install export PATH=/kangyufei/work/MMseqs2/build/bin/:$PATH export PATH=/kangyufei/work/MMseqs2/build/util/:$PATH

mkdir /kangyufei/work/hh-suite/build cd /kangyufei/work/hh-suite/build cmake -DCMAKE_INSTALL_PREFIX=. .. make make install export HHLIB=/kangyufei/work/hh-suite export PATH=/kangyufei/work/hh-suite/build/bin/:$PATH export PATH=~/kangyufei/work/hh-suite/build/scripts/:$PATH

cd /kangyufei/work/argtable2-13 chmod a+x tests/*.sh chmod a+x configure ./configure --prefix=/public/dbu/kangyufei/work/argtable2-13/build/ make check make make install export PATH=/kangyufei/work/argtable2-13:$PATH export PATH=/kangyufei/work/argtable2-13/build/lib:$PATH export PATH=/kangyufei/work/argtable2-13/build/include:$PATH export LD_LIBRARY_PATH=~/kangyufei/work/argtable2-13/build/lib:$LD_LIBRARY_PATH

cd /kangyufei/work/clustal-omega-1.2.4 chmod a+x configure ./configure CFLAGS='-I/public/dbu/kangyufei/work/argtable2-13/build/include/' LDFLAGS='-L/public/dbu/kangyufei/work/argtable2-13/build/lib/' --prefix=/public/dbu/kangyufei/work/clustal-omega-1.2.4/build/ make check make make install export PATH=/kangyufei/work/clustal-omega-1.2.4:$PATH export PATH=/kangyufei/work/clustal-omega-1.2.4/build/bin:$PATH export PATH=/kangyufei/work/clustal-omega-1.2.4/build/include:$PATH

cd /kangyufei/work/kalign mkdir build cd build cmake .. make make test make install export PATH=/kangyufei/work/kalign:$PATH export PATH=/kangyufei/work/kalign/build/lib:$PATH export PATH=/kangyufei/work/kalign/build/bin:$PATH export PATH=~/kangyufei/work/kalign/build/include:$PATH

cd /kangyufei/work/hashdeep-4.4 sh bootstrap.sh ./configure --prefix=/public/dbu/kangyufei/work/hashdeep-4.4/build/ make make install export PATH=/kangyufei/work/hashdeep-4.4:$PATH export PATH=~/kangyufei/work/hashdeep-4.4/build/bin:$PATH

cd /kangyufei/work/FAMSA-master make export PATH=/kangyufei/work/FAMSA-master:$PATH

初始化环境变量,路径请自行修改

export PATH=/kangyufei/work/MMseqs2/build/bin/:$PATH export PATH=/kangyufei/work/MMseqs2/build/util/:$PATH

export HHLIB=/kangyufei/work/hh-suite/build export PATH=/kangyufei/work/hh-suite/build/bin/:$PATH export PATH=~/kangyufei/work/hh-suite/build/scripts/:$PATH

export PATH=/kangyufei/work/argtable2-13/:$PATH export PATH=/kangyufei/work/argtable2-13/build/lib/:$PATH export PATH=/kangyufei/work/argtable2-13/build/include/:$PATH export LD_LIBRARY_PATH=/kangyufei/work/argtable2-13/build/lib/:$LD_LIBRARY_PATH

export PATH=/kangyufei/work/clustal-omega-1.2.4:$PATH export PATH=/kangyufei/work/clustal-omega-1.2.4/build/bin:$PATH export PATH=~/kangyufei/work/clustal-omega-1.2.4/build/include:$PATH

export PATH=/kangyufei/work/kalign:$PATH export PATH=/kangyufei/work/kalign/build/lib:$PATH export PATH=/kangyufei/work/kalign/build/bin:$PATH export PATH=/kangyufei/work/kalign/build/include:$PATH

export PATH=/kangyufei/work/hashdeep-4.4:$PATH export PATH=/kangyufei/work/hashdeep-4.4/build/bin:$PATH

export PATH=~/kangyufei/work/FAMSA-master:$PATH