Guard against concurrent launcher sessions #5
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| name: Build and Push Docker Images | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - master | |
| paths-ignore: | |
| - '**.md' | |
| - 'docs/**' | |
| - '.gitignore' | |
| pull_request: | |
| branches: | |
| - main | |
| - master | |
| release: | |
| types: [published] | |
| workflow_dispatch: | |
| env: | |
| DOCKER_USERNAME: saldenisov | |
| IMAGE_NAME: skana | |
| jobs: | |
| r-tests: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Set up R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: '4.4.1' | |
| - name: Install test dependencies | |
| shell: Rscript {0} | |
| run: | | |
| options(repos = c(CRAN = "https://cloud.r-project.org")) | |
| install.packages(c( | |
| "shiny", "shinythemes", "shinycssloaders", "DT", "outliers", | |
| "nnls", "Iso", "httpuv", "Rsolnp", "fields", "NMFN", | |
| "rgenoud", "mvtnorm", "deSolve", "msm", "xtable", "magrittr", | |
| "RColorBrewer", "viridisLite", "changepoint", "testthat", | |
| "withr", "purrr", "callr", "processx" | |
| )) | |
| if (!requireNamespace("shinyBS", quietly = TRUE)) { | |
| try(install.packages("shinyBS"), silent = TRUE) | |
| if (!requireNamespace("shinyBS", quietly = TRUE)) { | |
| install.packages("remotes") | |
| remotes::install_github("ebailey78/shinyBS") | |
| } | |
| } | |
| - name: Run testthat suite | |
| run: Rscript tests/testthat.R | |
| build-and-push: | |
| needs: r-tests | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: read | |
| packages: write | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Set up QEMU | |
| uses: docker/setup-qemu-action@v3 | |
| with: | |
| platforms: linux/amd64,linux/arm64 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Log in to Docker Hub | |
| uses: docker/login-action@v3 | |
| with: | |
| username: ${{ env.DOCKER_USERNAME }} | |
| password: ${{ secrets.DOCKER_HUB_TOKEN }} | |
| - name: Extract metadata for Docker | |
| id: meta | |
| uses: docker/metadata-action@v5 | |
| with: | |
| images: | | |
| ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }} | |
| tags: | | |
| type=ref,event=branch | |
| type=ref,event=pr | |
| type=semver,pattern={{version}} | |
| type=semver,pattern={{major}}.{{minor}} | |
| type=semver,pattern={{major}} | |
| type=raw,value=latest,enable={{is_default_branch}} | |
| - name: Build and push amd64 image | |
| uses: docker/build-push-action@v5 | |
| with: | |
| context: . | |
| file: ./Dockerfile | |
| platforms: linux/amd64 | |
| push: ${{ github.event_name != 'pull_request' }} | |
| tags: ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest-amd64 | |
| cache-from: type=registry,ref=${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:buildcache-amd64 | |
| cache-to: type=registry,ref=${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:buildcache-amd64,mode=max | |
| - name: Build and push arm64 image | |
| uses: docker/build-push-action@v5 | |
| with: | |
| context: . | |
| file: ./Dockerfile.arm64 | |
| platforms: linux/arm64 | |
| push: ${{ github.event_name != 'pull_request' }} | |
| tags: ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest-arm64 | |
| cache-from: type=registry,ref=${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:buildcache-arm64 | |
| cache-to: type=registry,ref=${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:buildcache-arm64,mode=max | |
| - name: Create and push multi-platform manifest | |
| if: github.event_name != 'pull_request' | |
| run: | | |
| docker buildx imagetools create -t ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest \ | |
| ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest-amd64 \ | |
| ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest-arm64 | |
| - name: Inspect multi-platform image | |
| if: github.event_name != 'pull_request' | |
| run: | | |
| docker buildx imagetools inspect ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest | |
| - name: Summary | |
| if: github.event_name != 'pull_request' | |
| run: | | |
| echo "### Docker Images Published :rocket:" >> $GITHUB_STEP_SUMMARY | |
| echo "" >> $GITHUB_STEP_SUMMARY | |
| echo "**Repository:** \`${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}\`" >> $GITHUB_STEP_SUMMARY | |
| echo "" >> $GITHUB_STEP_SUMMARY | |
| echo "**Tags:**" >> $GITHUB_STEP_SUMMARY | |
| echo "- \`latest\` (multi-platform: amd64, arm64)" >> $GITHUB_STEP_SUMMARY | |
| echo "- \`latest-amd64\` (for Windows, Linux, Intel Mac)" >> $GITHUB_STEP_SUMMARY | |
| echo "- \`latest-arm64\` (for Mac Apple Silicon)" >> $GITHUB_STEP_SUMMARY | |
| echo "" >> $GITHUB_STEP_SUMMARY | |
| echo "**Usage:**" >> $GITHUB_STEP_SUMMARY | |
| echo "\`\`\`bash" >> $GITHUB_STEP_SUMMARY | |
| echo "# Multi-platform (automatically selects correct architecture)" >> $GITHUB_STEP_SUMMARY | |
| echo "docker run -d -p 3840:3840 --name skana ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest" >> $GITHUB_STEP_SUMMARY | |
| echo "" >> $GITHUB_STEP_SUMMARY | |
| echo "# Or specify architecture explicitly" >> $GITHUB_STEP_SUMMARY | |
| echo "docker run -d -p 3840:3840 --name skana ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest-amd64" >> $GITHUB_STEP_SUMMARY | |
| echo "docker run -d -p 3840:3840 --name skana ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest-arm64" >> $GITHUB_STEP_SUMMARY | |
| echo "\`\`\`" >> $GITHUB_STEP_SUMMARY |