SK-Ana/.github/workflows/docker-build-push.yml at a5f3c7e1ed88571425646a6fdb8d549f2ae95dd3 · Saldenisov/SK-Ana · GitHub

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name: Build and Push Docker Images

on:
  push:
    branches:
      - main
      - master
    paths-ignore:
      - '**.md'
      - 'docs/**'
      - '.gitignore'
  pull_request:
    branches:
      - main
      - master
  release:
    types: [published]
  workflow_dispatch:

env:
  DOCKER_USERNAME: saldenisov
  IMAGE_NAME: skana

jobs:
  r-tests:
    runs-on: ubuntu-latest

    steps:
      - name: Checkout code
        uses: actions/checkout@v4

      - name: Set up R
        uses: r-lib/actions/setup-r@v2
        with:
          r-version: '4.4.1'

      - name: Install test dependencies
        shell: Rscript {0}
        run: |
          options(repos = c(CRAN = "https://cloud.r-project.org"))
          install.packages(c(
            "shiny", "shinythemes", "shinycssloaders", "DT", "outliers",
            "nnls", "Iso", "httpuv", "Rsolnp", "fields", "NMFN",
            "rgenoud", "mvtnorm", "deSolve", "msm", "xtable", "magrittr",
            "RColorBrewer", "viridisLite", "changepoint", "testthat",
            "withr", "purrr", "callr", "processx"
          ))

          if (!requireNamespace("shinyBS", quietly = TRUE)) {
            try(install.packages("shinyBS"), silent = TRUE)
            if (!requireNamespace("shinyBS", quietly = TRUE)) {
              install.packages("remotes")
              remotes::install_github("ebailey78/shinyBS")
            }
          }

      - name: Run testthat suite
        run: Rscript tests/testthat.R

  build-and-push:
    needs: r-tests
    runs-on: ubuntu-latest
    permissions:
      contents: read
      packages: write

    steps:
      - name: Checkout code
        uses: actions/checkout@v4

      - name: Set up QEMU
        uses: docker/setup-qemu-action@v3
        with:
          platforms: linux/amd64,linux/arm64

      - name: Set up Docker Buildx
        uses: docker/setup-buildx-action@v3

      - name: Log in to Docker Hub
        uses: docker/login-action@v3
        with:
          username: ${{ env.DOCKER_USERNAME }}
          password: ${{ secrets.DOCKER_HUB_TOKEN }}

      - name: Extract metadata for Docker
        id: meta
        uses: docker/metadata-action@v5
        with:
          images: |
            ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}
          tags: |
            type=ref,event=branch
            type=ref,event=pr
            type=semver,pattern={{version}}
            type=semver,pattern={{major}}.{{minor}}
            type=semver,pattern={{major}}
            type=raw,value=latest,enable={{is_default_branch}}

      - name: Build and push amd64 image
        uses: docker/build-push-action@v5
        with:
          context: .
          file: ./Dockerfile
          platforms: linux/amd64
          push: ${{ github.event_name != 'pull_request' }}
          tags: ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest-amd64
          cache-from: type=registry,ref=${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:buildcache-amd64
          cache-to: type=registry,ref=${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:buildcache-amd64,mode=max

      - name: Build and push arm64 image
        uses: docker/build-push-action@v5
        with:
          context: .
          file: ./Dockerfile.arm64
          platforms: linux/arm64
          push: ${{ github.event_name != 'pull_request' }}
          tags: ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest-arm64
          cache-from: type=registry,ref=${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:buildcache-arm64
          cache-to: type=registry,ref=${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:buildcache-arm64,mode=max

      - name: Create and push multi-platform manifest
        if: github.event_name != 'pull_request'
        run: |
          docker buildx imagetools create -t ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest \
            ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest-amd64 \
            ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest-arm64

      - name: Inspect multi-platform image
        if: github.event_name != 'pull_request'
        run: |
          docker buildx imagetools inspect ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest

      - name: Summary
        if: github.event_name != 'pull_request'
        run: |
          echo "### Docker Images Published :rocket:" >> $GITHUB_STEP_SUMMARY
          echo "" >> $GITHUB_STEP_SUMMARY
          echo "**Repository:** \`${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}\`" >> $GITHUB_STEP_SUMMARY
          echo "" >> $GITHUB_STEP_SUMMARY
          echo "**Tags:**" >> $GITHUB_STEP_SUMMARY
          echo "- \`latest\` (multi-platform: amd64, arm64)" >> $GITHUB_STEP_SUMMARY
          echo "- \`latest-amd64\` (for Windows, Linux, Intel Mac)" >> $GITHUB_STEP_SUMMARY
          echo "- \`latest-arm64\` (for Mac Apple Silicon)" >> $GITHUB_STEP_SUMMARY
          echo "" >> $GITHUB_STEP_SUMMARY
          echo "**Usage:**" >> $GITHUB_STEP_SUMMARY
          echo "\`\`\`bash" >> $GITHUB_STEP_SUMMARY
          echo "# Multi-platform (automatically selects correct architecture)" >> $GITHUB_STEP_SUMMARY
          echo "docker run -d -p 3840:3840 --name skana ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest" >> $GITHUB_STEP_SUMMARY
          echo "" >> $GITHUB_STEP_SUMMARY
          echo "# Or specify architecture explicitly" >> $GITHUB_STEP_SUMMARY
          echo "docker run -d -p 3840:3840 --name skana ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest-amd64" >> $GITHUB_STEP_SUMMARY
          echo "docker run -d -p 3840:3840 --name skana ${{ env.DOCKER_USERNAME }}/${{ env.IMAGE_NAME }}:latest-arm64" >> $GITHUB_STEP_SUMMARY
          echo "\`\`\`" >> $GITHUB_STEP_SUMMARY