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Utilizing scFATES with two biological conditions.

Status: Open.

#59 In LouisFaure/scFates;

· asif7adil opened on Jun 9, 2026

scf.pl.trajectory: Arrow size linked to dpi

Status: Open.

#57 In LouisFaure/scFates;

· rwiegan opened on Feb 17, 2026

Questions about tutorials, CellRank2 compatibility, and GPU usage

Status: Open.

#52 In LouisFaure/scFates;

· asmlgkj opened on Dec 8, 2025

Pseudotime computation fails when cells_back has fewer columns than boo

Status: Open.

#47 In LouisFaure/scFates;

· tianxin-wang opened on May 30, 2025

Broken tree

Status: Open.

#40 In LouisFaure/scFates;

· izu0421 opened on Jan 31, 2025

3 milesones make error in scf.tl.linearity_deviation.

Status: Open.

#37 In LouisFaure/scFates;

· ChaewonKim99 opened on Nov 12, 2024

Compatibility Issue with pandas in scFates 1.0.8 while i use tl.test_fork

Status: Open.

#35 In LouisFaure/scFates;

· Almasimaryam opened on Oct 23, 2024

get a weird figure following the notebook named Bone marrow fates

Status: Open.

#32 In LouisFaure/scFates;

· huili469r opened on May 17, 2024

Maximum complexity of trees [question]

Status: Open.

#29 In LouisFaure/scFates;

· vitkl opened on Mar 3, 2024