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cardio
cardio
 
 
pipeline
pipeline
 
 
tcl_packages
tcl_packages
 
 
.bash_profile
.bash_profile
 
 
.bashrc
.bashrc
 
 
.bowerrc
.bowerrc
 
 
.git.bash
.git.bash
 
 
.gitconfig
.gitconfig
 
 
.gitignore
.gitignore
 
 
.ls_colours_bash-bgblack
.ls_colours_bash-bgblack
 
 
C_chrisDCM.py
C_chrisDCM.py
 
 
Makefile
Makefile
 
 
PACS_QR.sh
PACS_QR.sh
 
 
README.md
README.md
 
 
adbb
adbb
 
 
addextensions.py
addextensions.py
 
 
age_calc.py
age_calc.py
 
 
aliases_make.bash
aliases_make.bash
 
 
android-select-device
android-select-device
 
 
annot.sh
annot.sh
 
 
areas_tabulate.sh
areas_tabulate.sh
 
 
asladcBatch_create.bash
asladcBatch_create.bash
 
 
asladc_b0_process.bash
asladc_b0_process.bash
 
 
asladc_batch.bash
asladc_batch.bash
 
 
asort.awk
asort.awk
 
 
autocroppdf.sh
autocroppdf.sh
 
 
backup.tcl
backup.tcl
 
 
backup_mgr.tcl
backup_mgr.tcl
 
 
bbget
bbget
 
 
bbox_clean.sh
bbox_clean.sh
 
 
blockFilter.py
blockFilter.py
 
 
blockSort.py
blockSort.py
 
 
bower.json
bower.json
 
 
brainmagix.sh
brainmagix.sh
 
 
centroid_curvAnalysis.py
centroid_curvAnalysis.py
 
 
centroid_groupAnalyze.bash
centroid_groupAnalyze.bash
 
 
chb-connectome
chb-connectome
 
 
chb-connectome-dbg
chb-connectome-dbg
 
 
chb-connectome-latest
chb-connectome-latest
 
 
chb-connectome-next
chb-connectome-next
 
 
chb-fs
chb-fs
 
 
chb-fs-old
chb-fs-old
 
 
chb-fsdev
chb-fsdev
 
 
chb-fsdev-next
chb-fsdev-next
 
 
chb-fsstable
chb-fsstable
 
 
chb-fsunstable
chb-fsunstable
 
 
chris-env
chris-env
 
 
chris-fsdev
chris-fsdev
 
 
chris_dcmXML_fix.py
chris_dcmXML_fix.py
 
 
chris_dcmXML_query.py
chris_dcmXML_query.py
 
 
cluster_genXML.bash
cluster_genXML.bash
 
 
cluster_kill.bash
cluster_kill.bash
 
 
cluster_run.bash
cluster_run.bash
 
 
cluster_status.bash
cluster_status.bash
 
 
cmp_trk_reprocess.bash
cmp_trk_reprocess.bash
 
 
cmp_trk_reprocess.py
cmp_trk_reprocess.py
 
 
cnt_mat.py
cnt_mat.py
 
 
col_div.awk
col_div.awk
 
 
col_div2.awk
col_div2.awk
 
 
col_divide.awk
col_divide.awk
 
 
col_filt.awk
col_filt.awk
 
 
col_mult.awk
col_mult.awk
 
 
col_prod.awk
col_prod.awk
 
 
col_rand.awk
col_rand.awk
 
 
col_weigh.awk
col_weigh.awk
 
 
common.bash
common.bash
 
 
config_neuropipe_env.example.bash
config_neuropipe_env.example.bash
 
 
connectome_meta-dbg.bash
connectome_meta-dbg.bash
 
 
connectome_meta.bash
connectome_meta.bash
 
 
connectome_trk-next.py
connectome_trk-next.py
 
 
connectome_trk.py
connectome_trk.py
 
 
connectome_web-dbg.py
connectome_web-dbg.py
 
 
connectome_web.py
connectome_web.py
 
 
curvFunc_perUnit.sh
curvFunc_perUnit.sh
 
 
curv_Kfilter.bash
curv_Kfilter.bash
 
 
d2u.awk
d2u.awk
 
 
data_summarize.sh
data_summarize.sh
 
 
date_diff.sh
date_diff.sh
 
 
dayAge_calc.awk
dayAge_calc.awk
 
 
dayAge_calc.py
dayAge_calc.py
 
 
dcm2trk.bash
dcm2trk.bash
 
 
dcm_MRIDget.bash
dcm_MRIDget.bash
 
 
dcm_MRIDgetXML.bash
dcm_MRIDgetXML.bash
 
 
dcm_agePerMRID.bash
dcm_agePerMRID.bash
 
 
dcm_anonymize.bash
dcm_anonymize.bash
 
 
dcm_batch.bash
dcm_batch.bash
 
 
dcm_bdayAgeGet.bash
dcm_bdayAgeGet.bash
 
 
dcm_coreg.bash
dcm_coreg.bash
 
 
dcm_coregAnalyze.bash
dcm_coregAnalyze.bash
 
 
dcm_jpg_decompressDir.sh
dcm_jpg_decompressDir.sh
 
 
dcm_mkIndx.bash
dcm_mkIndx.bash
 
 
dcm_rename
dcm_rename
 
 
dcm_rename.MRID
dcm_rename.MRID
 
 
dcm_xcs.bash
dcm_xcs.bash
 
 
dcmanon_meta.bash
dcmanon_meta.bash
 
 
dcmsend_meta.bash
dcmsend_meta.bash
 
 
decompJpegDcmDir
decompJpegDcmDir
 
 
dgmsocket.py
dgmsocket.py
 
 
dicomTag.py
dicomTag.py
 
 
dicom_dirSend.bash
dicom_dirSend.bash
 
 

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scripts

Various Scripts. Needs some ordering.

pre-requisite

  • git
  • npm

installation

$> git clone https://github.com/FNNDSC/scripts.git
$> cd scripts
$> npm install

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Various Scripts

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