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Convert IRangesOverview.Rnw to IRangesOverview.Rmd #49

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Convert IRangesOverview.Rnw to IRangesOverview.Rmd #49

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69705d5
Update DESCRIPTION with BiocStyle, knitr, VignetteBuilder
sonali8434 Jun 8, 2023
7986cb8
Convert file to Rmd
sonali8434 Jun 12, 2023
8c1fc13
Remove file.Rnw
sonali8434 Jun 12, 2023
d51fec6
Updated the links, objects and functions
sonali8434 Jun 13, 2023
002eaaf
updated Discription, added sonali as contributor in.Rmd
sonali8434 Jun 13, 2023
22bcb7a
Update DESCRIPTION
sonali8434 Jun 13, 2023
253377d
Update IRangesOverview.Rmd after first review
sonali8434 Jun 16, 2023
45d5f03
Removed `pgap` section.
sonali8434 Jun 28, 2023
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9 changes: 6 additions & 3 deletions DESCRIPTION
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Original file line number Diff line number Diff line change
Expand Up @@ -15,15 +15,17 @@ License: Artistic-2.0
Encoding: UTF-8
Authors@R: c(
person("Hervé", "Pagès", role=c("aut", "cre"),
email="hpages.on.github@gmail.com"),
email="hpages.on.github@gmail.com"),
person("Patrick", "Aboyoun", role="aut"),
person("Michael", "Lawrence", role="aut"))
person("Michael", "Lawrence", role="aut"),
person("Sonali", "Kumari", role="ctb",
comment="Converted IrangesOverview vignette from Sweave to RMarkdown / HTML."))
Depends: R (>= 4.0.0), methods, utils, stats,
BiocGenerics (>= 0.39.2), S4Vectors (>= 0.33.3)
Imports: stats4
LinkingTo: S4Vectors
Suggests: XVector, GenomicRanges, Rsamtools, GenomicAlignments, GenomicFeatures,
BSgenome.Celegans.UCSC.ce2, pasillaBamSubset, RUnit, BiocStyle
BSgenome.Celegans.UCSC.ce2, pasillaBamSubset, RUnit, BiocStyle, knitr
Collate: range-squeezers.R
Vector-class-leftovers.R
DataFrameList-class.R
Expand Down Expand Up @@ -79,3 +81,4 @@ Collate: range-squeezers.R
tile-methods.R
extractListFragments.R
zzz.R
VignetteBuilder: knitr
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