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Changelog

3.1.1 (2025-12-18)

Bug Fixes

  • get sra download to work and test it (#102) (a9854f6)

3.1.0 (2025-09-10)

Features

  • add new (logging) output to star_align (#97) (d365a2c)

3.0.1 (2025-09-05)

Bug Fixes

  • consistently provide extra params for star rules (#95) (b975537)

3.0.0 (2025-09-04)

⚠ BREAKING CHANGES

  • use fastp instead of cutadapt for adapter trimming (#93)
  • update all snakemake wrapper and conda environment tool versions

Features

  • use fastp instead of cutadapt for adapter trimming (#93) (3c86b1a)

2.1.2 (2024-06-05)

Bug Fixes

  • use derived input for star_index (#81) (87fffe6)

2.1.1 (2024-03-25)

Bug Fixes

  • release-please branch to master and set permissions (#79) (4b781cf)
  • remove unused ftp RemoteProvider and require recent snakemake 8 (#76) (0f18be7)

Performance Improvements

  • update all wrapper to latest v3.5.3 (#78) (bc9ab71)