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    29 repositories

    • djimaging

      Public
      2P imaging data joint tables and schemas
      Python
      •
      MIT License
      •0•2•14•2•Updated Jul 30, 2026Jul 30, 2026

    • eyewire2-functional-analysis

      Public
      Preliminary analysis pipeline of functional data of OGB-1 recordings for Eyewire2 dataset.
      Jupyter Notebook
      •
      MIT License
      •1•1•1•0•Updated Jul 30, 2026Jul 30, 2026

    • all-GCL-manuscript

      Public
      A repository for reproducing the main figures and loading the data for the "all-GCL" manuscript.
      Jupyter Notebook
      •
      MIT License
      •0•0•1•0•Updated Jul 24, 2026Jul 24, 2026

    • QDSpy

      Public
      QDSpy - a Python software for scripting and presenting stimuli for visual neuroscience.
      neurosciencepython3stimulus-presentation
      neurosciencepython3stimulus-presentation
      Python
      •
      MIT License
      •9•11•6•0•Updated Jul 21, 2026Jul 21, 2026

    • python-course-2026

      Public
      Repository for the GTC Neuroscience Python course 2026
      Jupyter Notebook
      •
      MIT License
      •0•5•0•0•Updated Jul 9, 2026Jul 9, 2026

    • QDSpy-stimuli-Documentation

      Public
      Exporting QDSpy stimuli to numpy arrays for ML models with additional visualization
      Jupyter Notebook
      •0•0•0•0•Updated May 22, 2026May 22, 2026

    • gcl_classifier

      Public
      RGC classifier refined for all-GCL project.
      Jupyter Notebook
      •0•0•0•0•Updated Apr 27, 2026Apr 27, 2026

    • ScanM_support

      Public
      Two-photon imaging software - Support
      Jupyter Notebook
      •0•0•1•0•Updated Mar 9, 2026Mar 9, 2026

    • s-on-alpha_dendrites

      Public
      This repository contains the data and models underlying the analyses published in Oesterle, Ran et al. (2024)
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Nov 11, 2025Nov 11, 2025

    • nitric_oxide_rgc_eLife

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Sep 3, 2025Sep 3, 2025

    • rd10_rgc

      Public
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Sep 3, 2025Sep 3, 2025

    • python-course-2025

      Public
      Information about the course "Basic Programming - Introduction into Python", summer term 2025
      MIT License
      •0•1•0•0•Updated Jun 27, 2025Jun 27, 2025

    • spectral-scanner

      Public
      Spectral scanner based on the mini spectrometer chip C12880MA
      jupyter-notebookspectrometermicropython-esp32
      jupyter-notebookspectrometermicropython-esp32visual-ecology
      Jupyter Notebook
      •
      MIT License
      •2•10•1•0•Updated Jun 6, 2025Jun 6, 2025

    • python-course-2025-Introducing-Python

      Public template
      Jupyter Notebook
      •
      MIT License
      •16•0•0•0•Updated Apr 9, 2025Apr 9, 2025

    • rgc-natstim-model

      Public
      Companion repository to publication "A chromatic feature detector in the retina signals visual context changes"
      Jupyter Notebook
      •1•1•0•0•Updated Oct 7, 2024Oct 7, 2024

    • amacrinecolor

      Public
      Code for Korympidou et al.
      Jupyter Notebook
      •0•0•0•0•Updated Oct 5, 2024Oct 5, 2024

    • open-visual-stimulator

      Public
      An arbitrary-spectrum spatial visual stimulator for vision research
      visualipython-notebookneuroscience
      visualipython-notebookneurosciencestimulatorlightcrafter
      Jupyter Notebook
      •
      MIT License
      •10•20•0•0•Updated Dec 6, 2023Dec 6, 2023

    • bc-motion

      Public
      Strauss, Korympidou et al.
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Oct 17, 2023Oct 17, 2023

    • hybrid-model

      Public
      Efficient coding of natural scenes for neural system identification
      Jupyter Notebook
      •
      MIT License
      •2•1•0•0•Updated Apr 25, 2023Apr 25, 2023

    • rave

      Public
      Jupyter Notebook
      •1•11•0•0•Updated Jan 11, 2023Jan 11, 2023

    • mouse-scene-cam

      Public
      Description of a "mouse cam", a UV-green camera to record footage from the natural habitat of mice
      retinanatural-scene-statisticsvisual-neuroscience
      retinanatural-scene-statisticsvisual-neurosciencemouse-visionopen-source-camera
      Jupyter Notebook
      •
      MIT License
      •2•4•0•0•Updated Nov 9, 2022Nov 9, 2022

    • ret_preproc

      Public
      Preprocessing Scripts
      IGOR Pro
      •7•0•0•0•Updated Jan 27, 2022Jan 27, 2022

    • neuralpredictors

      Public
      Machine Learning Utils of Sinzlab
      Python
      •
      MIT License
      •47•0•0•0•Updated Dec 15, 2021Dec 15, 2021

    • lightcrafter

      Public
      Python
      •
      MIT License
      •2•2•0•0•Updated Feb 26, 2021Feb 26, 2021

    • nnfabrik

      Public
      A generalized model fitting pipeline that houses models, trainers, and datasets in datajoint and returns as well as stores trained models.
      Jupyter Notebook
      •25•0•0•0•Updated Feb 6, 2021Feb 6, 2021

    • processing_pypeline

      Public
      functions to process scanM files (experimental data) with python.
      Jupyter Notebook
      •3•2•0•0•Updated Apr 26, 2019Apr 26, 2019

    • published_data

      Public
      Datasets for published papers
      dataset
      dataset
      Jupyter Notebook
      •
      MIT License
      •1•1•0•0•Updated Mar 30, 2018Mar 30, 2018

    • SREEB

      Public
      Simple Research Equipment Extension Box
      C++
      •1•0•0•0•Updated Mar 22, 2018Mar 22, 2018

    • QDSpy_stimuli

      Public
      visual stimuli for QDSpy used by the eulerlab
      Python
      •0•0•0•0•Updated Mar 2, 2017Mar 2, 2017
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