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@AAGI-AUS Analytics for the Australian Grains Industry (AAGI)

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    45 repositories

    • AAGI-Style-Guide-and-Logos

      Public
      The AAGI Logo and Comms Style Guide and Logo Files
      0•0•10•0•Updated Aug 13, 2026Aug 13, 2026

    • nert

      Public
      An API Client for TERN Data Resources
      R
      •
      Other
      •1•3•0•0•Updated Aug 12, 2026Aug 12, 2026

    • PBS-COP

      Public
      RD project for continuous development of a software suite and a community of practice in crop analytics
      MIT License
      •0•0•10•0•Updated Aug 10, 2026Aug 10, 2026

    • SILO-Weather-Downloader-Plus

      Public
      Interactive R Shiny application for downloading and exporting Grid Point (Data Drill) and APSIM formatted SILO climate datasets. Provides visual and summarised …
      R
      •
      MIT License
      •0•0•0•0•Updated Aug 6, 2026Aug 6, 2026

    • AAGIQuarto

      Public
      A Quarto Extension for AAGI Themed Products, e.g., PDF, Word, HTML, revealjs, and PPT for AAGI staff
      literate-programmingquartoquarto-extension
      literate-programmingquartoquarto-extension
      TeX
      •
      MIT License
      •3•5•2•0•Updated Jul 30, 2026Jul 30, 2026

    • rippo

      Public
      Helper functions that ease preparing the AAGI IPPO register.
      R
      •
      Other
      •1•1•0•0•Updated Jul 29, 2026Jul 29, 2026

    • AAGIThemes

      Public
      AAGI Branding for R Graphical and Tabular Outputs
      R
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Jul 20, 2026Jul 20, 2026

    • flexyBayes

      Public
      Multi-backend Bayesian hierarchical modelling with cross-engine triangulation (greta, INLA, brms)
      R
      •
      GNU General Public License v3.0
      •0•0•0•6•Updated Jul 9, 2026Jul 9, 2026

    • geefetch

      Public
      Python-free R interface for extracting spatio-temporal environmental covariates from Google Earth Engine
      R
      •0•0•2•2•Updated Jul 7, 2026Jul 7, 2026

    • AAGISurvey

      Public
      Tools for working with AAGI Surveys for Collecting Data from Service and Support Partners
      r
      r
      R
      •
      Other
      •0•0•0•0•Updated Jul 6, 2026Jul 6, 2026

    • CBADASReml

      Public
      A collection of helper functions for small-plot trial analysis using ASReml-R
      ragricultureagriculture-research
      ragricultureagriculture-researchagricultural-modellingagriculture-dataagricultural-analysis
      R
      •
      GNU General Public License v3.0
      •0•1•3•1•Updated Jun 29, 2026Jun 29, 2026

    • ofe-analysis

      Public
      On-Farm Experimentation (OFE) mean analysis package
      R
      •
      MIT License
      •0•0•2•1•Updated Jun 28, 2026Jun 28, 2026

    • Sorientale-structural-mutants

      Public
      In silico protein analysis and docking for the manuscript - Mutational studies in Aux/IAA protein provides new insights into their contribution to auxin herbici…
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 1, 2026Jun 1, 2026

    • PESTO

      Public
      Parameter Estimation, Surrogates, and Tooling for Optimisation — High-performance R package for model-independent parameter estimation and uncertainty quantific…
      R
      •
      Other
      •0•0•0•0•Updated May 28, 2026May 28, 2026

    • aagi-aus.r-universe.dev

      Public
      AAGI-AUS R-Universe Packages
      Other
      •0•0•0•0•Updated May 26, 2026May 26, 2026

    • AAGIPalettes

      Public
      AAGI Colours and Colour Palettes for R
      R
      •
      Other
      •0•3•0•0•Updated May 26, 2026May 26, 2026

    • .github

      Public
      0•0•0•0•Updated May 26, 2026May 26, 2026

    • AAGISurveyApp

      Public
      A Shiny App Front End for Generating AAGI S&S Survey URLs
      R
      •
      Other
      •0•0•0•0•Updated May 26, 2026May 26, 2026

    • AAGIOfficeTemplates

      Public
      Microsoft Word and PowerPoint templates for AAGI documents and presentations.
      Other
      •0•0•0•0•Updated May 4, 2026May 4, 2026

    • kernR

      Public
      Kernel-based causal distributional testing for R (bd-HSIC, DR-DATE, DR-DETT)
      R
      •
      Other
      •0•0•0•0•Updated Apr 25, 2026Apr 25, 2026

    • AAGIverse-shared-code

      Public
      Consolidate our analytical code and create a searchable database as part of AAGI-PBS ("AAGIverse")
      R
      •
      GNU General Public License v3.0
      •0•2•9•1•Updated Apr 24, 2026Apr 24, 2026

    • causaliflower

      Public
      Build and assess causal graphs for causal analysis in R.
      R
      •
      MIT License
      •0•0•0•0•Updated Apr 18, 2026Apr 18, 2026

    • kernP

      Public
      Kernel-based causal distributional testing for Python (bd-HSIC, DR-DATE, DR-DETT)
      Python
      •
      MIT License
      •0•0•0•0•Updated Apr 10, 2026Apr 10, 2026

    • AAGIQuartoExtra

      Public
      Facilitates the Creation of AAGI Quarto Documents
      R
      •
      Other
      •0•0•0•0•Updated Apr 9, 2026Apr 9, 2026

    • effectsurf

      Public
      Interactive 3D Estimated Marginal Surfaces for conditional effect visualisation from fitted statistical models
      R
      •
      Other
      •0•0•0•0•Updated Apr 7, 2026Apr 7, 2026

    • bayesreml

      Public
      Flexible Bayesian framework for ASReml-compatible inference and prediction
      R
      •
      GNU General Public License v3.0
      •0•2•1•0•Updated Apr 7, 2026Apr 7, 2026

    • InPlotSampling

      Public
      A package for ranked set sampling and statistical inference
      R
      •
      Other
      •0•5•2•0•Updated Mar 27, 2026Mar 27, 2026

    • AAGI-AUS.github.io

      Public
      Website for AAGI-AUS
      SCSS
      •0•0•2•1•Updated Mar 2, 2026Mar 2, 2026

    • qcflow-rnaseq

      Public
      :white_check_mark: :rotating_light: QC and alignement pipeline for RNA-seq reads
      Nextflow
      •
      Apache License 2.0
      •0•0•4•0•Updated Jan 19, 2026Jan 19, 2026

    • pbs-blog

      Public
      0•0•1•0•Updated Jan 15, 2026Jan 15, 2026
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