Merge pull request #154 from neurogenomics/dev2 #240
Annotations
26 errors, 17 warnings, and 1 notice
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macOS-latest (latest)
[Workflow Telemetry] getStackedAreaGraph {"options":{"width":1000,"height":500,"xAxis":{"label":"Time"},"yAxis":{"label":"Memory Usage (MB)"},"timeTicks":{"unit":"auto"}},"areas":[{"label":"Used","color":"#377eb899","points":[{"x":1777985650528,"y":3064.046875},{"x":1777985655527,"y":3053.484375},{"x":1777985660523,"y":3039.125},{"x":1777985665520,"y":3003.578125},{"x":1777985670522,"y":2975.6875},{"x":1777985675524,"y":2969.953125},{"x":1777985680520,"y":2952.203125},{"x":1777985685520,"y":2834.765625},{"x":1777985690520,"y":2843.53125},{"x":1777985695520,"y":2934.578125},{"x":1777985700521,"y":2810.296875},{"x":1777985705522,"y":2940.875},{"x":1777985710524,"y":2529.234375},{"x":1777985715523,"y":2615.296875},{"x":1777985720521,"y":2711.203125},{"x":1777985725521,"y":2881.625},{"x":1777985730521,"y":2958.796875},{"x":1777985735522,"y":2942.84375},{"x":1777985740522,"y":2905.375},{"x":1777985745521,"y":1360.734375},{"x":1777985750521,"y":1505.015625},{"x":1777985755522,"y":1771.28125},{"x":1777985760528,"y":1833.59375},{"x":1777985765524,"y":1859.703125},{"x":1777985770521,"y":1869.640625},{"x":1777985775520,"y":1884.65625},{"x":1777985780521,"y":1932.1875},{"x":1777985785521,"y":2333.3125},{"x":1777985790520,"y":2437.109375},{"x":1777985795521,"y":2550.984375},{"x":1777985800520,"y":2654.09375},{"x":1777985805520,"y":2654.765625},{"x":1777985810520,"y":2661.40625},{"x":1777985815520,"y":2662.609375},{"x":1777985820520,"y":2666.09375},{"x":1777985825521,"y":2649.828125},{"x":1777985830520,"y":2659.28125},{"x":1777985835521,"y":2671.90625},{"x":1777985840521,"y":1675.921875},{"x":1777985845521,"y":1726.046875},{"x":1777985850521,"y":1788.375},{"x":1777985855521,"y":1847.640625},{"x":1777985860520,"y":1916.390625},{"x":1777985865522,"y":2102.21875},{"x":1777985870520,"y":2086.734375},{"x":1777985875523,"y":2248.859375},{"x":1777985880523,"y":2216.09375},{"x":1777985885522,"y":2226.734375},{"x":1777985890553,"y":2274.921875},{"x":1777985895523,"y":2279.84375},{"x":1777985900520,"y":2313.546875},{"x":1777985905522,"y":2319.28125},{"x":1777985910522,"y":2319.734375},{"x":1777985915522,"y":2358.890625},{"x":1777985920522,"y":2476.171875},{"x":1777985925520,"y":2454.703125},{"x":1777985930523,"y":2472.453125},{"x":1777985935522,"y":2478.96875},{"x":1777985940520,"y":2525.5},{"x":1777985945522,"y":2526.96875},{"x":1777985950522,"y":2576.265625},{"x":1777985955524,"y":2624.609375},{"x":1777985960520,"y":2630.171875},{"x":1777985965520,"y":2578.125},{"x":1777985970522,"y":2585.640625},{"x":1777985975523,"y":2628.625},{"x":1777985980521,"y":2630.265625},{"x":1777985985520,"y":2640.234375},{"x":1777985990521,"y":2645.03125},{"x":1777985995520,"y":2776.296875},{"x":1777986000525,"y":2818.703125},{"x":1777986005522,"y":2860.921875},{"x":1777986010524,"y":2880.953125},{"x":1777986015521,"y":2885.125},{"x":1777986020520,"y":2889.5625},{"x":1777986025524,"y":2892.96875},{"x":1777986030521,"y":2895.46875},{"x":1777986035520,"y":2902.84375},{"x":1777986040520,"y":2902.953125},{"x":1777986045521,"y":2904.515625},{"x":1777986050520,"y":2904.953125},{"x":1777986055523,"y":2617.640625},{"x":1777986060523,"y":2286.1875},{"x":1777986065523,"y":2363.921875},{"x":1777986070521,"y":2377.75},{"x":1777986075523,"y":2417.40625},{"x":1777986080521,"y":2420.21875},{"x":1777986085521,"y":2422.265625},{"x":1777986090521,"y":2404.078125},{"x":1777986095521,"y":2404.09375},{"x":1777986100521,"y":2405.734375},{"x":1777986105523,"y":2414.375},{"x":1777986110522,"y":2411.84375},{"x":1777986115522,"y":2424.546875},{"x":1777986120523,"y":2311.375},{"x":1777986125521,"y":2017.921875},{"x":1777986130523,"y":2123.21875},{"x":1777986135521,"y":2267.8125},{"x":1777986140524,"y":2279.3125},{"x":1777986145523,"y":2404.234375},{"x":1777986150521,"y":2650.5},{"x":1777986155529,"y":2838.640625},{"x":1777986160520,"y":2900.65625},{"x":1777986165523,"y":2877.875},{"x":1777986170521,"y":2892.390625},{"x":1777986175522,"y":2893.328125},{"x":1777986180522,"y":2615.734375},{"x":1777986185521,"y":2865.65625},{"x":1777986190520,"y":2862.0625},{"x":1777986195521,"y":2869.796875},
|
|
macOS-latest (latest)
AxiosError: Request failed with status code 403
|
|
macOS-latest (latest)
[Workflow Telemetry] AxiosError
|
|
macOS-latest (latest)
[Workflow Telemetry] getStackedAreaGraph {"options":{"width":1000,"height":500,"xAxis":{"label":"Time"},"yAxis":{"label":"CPU Load (%)"},"timeTicks":{"unit":"auto"}},"areas":[{"label":"User Load","color":"#e41a1c99","points":[{"x":1777985650528,"y":40.7793877651946},{"x":1777985655527,"y":31.19572478289913},{"x":1777985660523,"y":35.714285714285715},{"x":1777985665520,"y":25.910931174089068},{"x":1777985670522,"y":45.998655010087425},{"x":1777985675524,"y":41.4780292942743},{"x":1777985680520,"y":37.2},{"x":1777985685520,"y":51.91661062542031},{"x":1777985690520,"y":44.74553866490417},{"x":1777985695520,"y":55.86253369272237},{"x":1777985700521,"y":50.03335557038026},{"x":1777985705522,"y":47.53661784287617},{"x":1777985710524,"y":40.839440373084614},{"x":1777985715523,"y":28.67696440564137},{"x":1777985720521,"y":34.07258064516129},{"x":1777985725521,"y":55.61461794019934},{"x":1777985730521,"y":33.734939759036145},{"x":1777985735522,"y":39.60132890365449},{"x":1777985740522,"y":33.77748167888075},{"x":1777985745521,"y":23.64002686366689},{"x":1777985750521,"y":42.274247491638796},{"x":1777985755522,"y":30.877427997320833},{"x":1777985760528,"y":35.86161011310712},{"x":1777985765524,"y":34.2},{"x":1777985770521,"y":35.66621803499327},{"x":1777985775520,"y":46.557377049180324},{"x":1777985780521,"y":44.151453684922245},{"x":1777985785521,"y":30.277044854881268},{"x":1777985790520,"y":15.578231292517005},{"x":1777985795521,"y":26.77376171352075},{"x":1777985800520,"y":18.758344459279037},{"x":1777985805520,"y":22.02020202020202},{"x":1777985810520,"y":20.43010752688172},{"x":1777985815520,"y":22.794117647058822},{"x":1777985820520,"y":17.25752508361204},{"x":1777985825521,"y":21.395036887994635},{"x":1777985830520,"y":23.557046979865774},{"x":1777985835521,"y":18.699731903485254},{"x":1777985840521,"y":15.461847389558233},{"x":1777985845521,"y":24.29718875502008},{"x":1777985850521,"y":42.263898191560614},{"x":1777985855521,"y":21.09115103127079},{"x":1777985860520,"y":28.034875922199866},{"x":1777985865522,"y":41.219350563286945},{"x":1777985870520,"y":49.36624416277519},{"x":1777985875523,"y":61.837692823608315},{"x":1777985880523,"y":56.715425531914896},{"x":1777985885522,"y":58.25503355704698},{"x":1777985890553,"y":59.94815294880104},{"x":1777985895523,"y":61.16838487972509},{"x":1777985900520,"y":64.58055925432757},{"x":1777985905522,"y":54.43629086057371},{"x":1777985910522,"y":23.18548387096774},{"x":1777985915522,"y":21.35728542914172},{"x":1777985920522,"y":34.91638795986622},{"x":1777985925520,"y":51.105157401205624},{"x":1777985930523,"y":57.05725699067909},{"x":1777985935522,"y":34.75935828877005},{"x":1777985940520,"y":37.21552878179384},{"x":1777985945522,"y":12.323232323232324},{"x":1777985950522,"y":12.684563758389261},{"x":1777985955524,"y":16.02951039570758},{"x":1777985960520,"y":10.409670920080591},{"x":1777985965520,"y":11.701412239408205},{"x":1777985970522,"y":10.441767068273093},{"x":1777985975523,"y":16.945746818486267},{"x":1777985980521,"y":8.607935440484196},{"x":1777985985520,"y":11.073825503355705},{"x":1777985990521,"y":9.206989247311828},{"x":1777985995520,"y":18.91711229946524},{"x":1777986000525,"y":19.39799331103679},{"x":1777986005522,"y":13.770053475935828},{"x":1777986010524,"y":12.944332662642521},{"x":1777986015521,"y":8.657718120805368},{"x":1777986020520,"y":9.50134770889488},{"x":1777986025524,"y":9.57803081044876},{"x":1777986030521,"y":10.678307588985897},{"x":1777986035520,"y":7.118871725990597},{"x":1777986040520,"y":10.671140939597315},{"x":1777986045521,"y":14.827127659574469},{"x":1777986050520,"y":11.924119241192411},{"x":1777986055523,"y":9.425133689839573},{"x":1777986060523,"y":11.08161911081619},{"x":1777986065523,"y":27.46955345060893},{"x":1777986070521,"y":12.466487935656836},{"x":1777986075523,"y":15.24966261808367},{"x":1777986080521,"y":8.400537634408602},{"x":1777986085521,"y":10.702341137123746},{"x":1777986090521,"y":8.10448760884126},{"x":1777986095521,"y":9.440323668240055},{"x":1777986100521,"y":8.57334226389819},{"x":1777986105523,"y":8.823529411764707},
|
|
macOS-latest (latest)
AxiosError: Request failed with status code 403
|
|
macOS-latest (latest)
[Workflow Telemetry] AxiosError
|
|
ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
|
|
ubuntu-latest (auto)
[Workflow Telemetry] Error
|
|
ubuntu-latest (auto)
[Workflow Telemetry] Unable to report stat collector result
|
|
ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
|
|
ubuntu-latest (auto)
[Workflow Telemetry] Error
|
|
ubuntu-latest (auto)
[Workflow Telemetry] Unable to finish stat collector
|
|
windows-latest (latest)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/checkout@v4, catchpoint/workflow-telemetry-action@v2. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
|
|
windows-latest (latest)
dependencies 'BiocVersion', 'BiocStyle' are not available
|
|
macOS-latest (latest)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/checkout@v4, catchpoint/workflow-telemetry-action@v2. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
|
|
macOS-latest (latest)
dependencies ‘BiocVersion’, ‘BiocStyle’ are not available
|
|
macOS-latest (latest)
fribidi 1.0.16 is already installed and up-to-date.
To reinstall 1.0.16, run:
brew reinstall fribidi
|
|
macOS-latest (latest)
harfbuzz 14.2.0 is already installed and up-to-date.
To reinstall 14.2.0, run:
brew reinstall harfbuzz
|
|
ubuntu-latest (auto)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/checkout@v4, catchpoint/workflow-telemetry-action@v2, docker/build-push-action@v6, docker/login-action@v3, docker/setup-buildx-action@v3. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
|
|
ubuntu-latest (auto):
inst/templates/docker.Rmd#L36
[lintr] Put spaces around all infix operators.
|
|
ubuntu-latest (auto):
inst/templates/docker.Rmd#L36
[lintr] Put a space after a comma.
|
|
ubuntu-latest (auto):
inst/templates/docker.Rmd#L36
[lintr] Put a space after a comma.
|
|
ubuntu-latest (auto):
inst/templates/docker.Rmd#L35
[lintr] Put a space between a right parenthesis and a body expression.
|
|
ubuntu-latest (auto):
inst/templates/docker.Rmd#L35
[lintr] There should be a space before an opening curly brace.
|
|
ubuntu-latest (auto):
inst/templates/docker.Rmd#L35
[lintr] Put a space after a comma.
|
|
ubuntu-latest (auto):
inst/templates/docker.Rmd#L35
[lintr] Place a space before left parenthesis, except in a function call.
|
|
ubuntu-latest (auto):
inst/templates/docker.Rmd#L34
[lintr] Remove trailing whitespace.
|
|
ubuntu-latest (auto):
inst/templates/docker.Rmd#L33
[lintr] Remove trailing whitespace.
|
|
ubuntu-latest (auto):
inst/templates/docker.Rmd#L27
[lintr] Variable and function name style should match snake_case or symbols.
|
|
windows-latest (latest)
NOTICE: windows-2025 requests are being redirected to windows-2025-vs2026 by May 12, 2026
|
Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
|
neurogenomics~rworkflows~YCRB1Y.dockerbuild
Expired
|
98.2 KB |
sha256:64cf4ed7973155060d0aacbef229afedbadd3ecd79a45fd72f33febf83e1dd9c
|
|