Update reference guide (#241)

* Update reference guide

* Update CODEOWNERS

Author: katarinasupe

.github/CODEOWNERS

@@ -1 +1 @@
-* @Josipmrden @katarinasupe @brunos252 @as51340
+* @Josipmrden @katarinasupe @brunos252 @as51340 @antepusic

docs/reference/gqlalchemy/connection.md

@@ -0,0 +1,106 @@
+---
+sidebar_label: connection
+title: gqlalchemy.connection
+---
+
+## Connection Objects
+
+```python
+class Connection(ABC)
+```
+
+#### execute
+
+```python
+@abstractmethod
+def execute(query: str, parameters: Dict[str, Any] = {}) -> None
+```
+
+Executes Cypher query without returning any results.
+
+#### execute\_and\_fetch
+
+```python
+@abstractmethod
+def execute_and_fetch(
+        query: str,
+        parameters: Dict[str, Any] = {}) -> Iterator[Dict[str, Any]]
+```
+
+Executes Cypher query and returns iterator of results.
+
+#### is\_active
+
+```python
+@abstractmethod
+def is_active() -> bool
+```
+
+Returns True if connection is active and can be used.
+
+## MemgraphConnection Objects
+
+```python
+class MemgraphConnection(Connection)
+```
+
+#### execute
+
+```python
+@database_error_handler
+def execute(query: str, parameters: Dict[str, Any] = {}) -> None
+```
+
+Executes Cypher query without returning any results.
+
+#### execute\_and\_fetch
+
+```python
+@database_error_handler
+def execute_and_fetch(
+        query: str,
+        parameters: Dict[str, Any] = {}) -> Iterator[Dict[str, Any]]
+```
+
+Executes Cypher query and returns iterator of results.
+
+#### is\_active
+
+```python
+def is_active() -> bool
+```
+
+Returns True if connection is active and can be used.
+
+## Neo4jConnection Objects
+
+```python
+class Neo4jConnection(Connection)
+```
+
+#### execute
+
+```python
+def execute(query: str, parameters: Dict[str, Any] = {}) -> None
+```
+
+Executes Cypher query without returning any results.
+
+#### execute\_and\_fetch
+
+```python
+def execute_and_fetch(
+        query: str,
+        parameters: Dict[str, Any] = {}) -> Iterator[Dict[str, Any]]
+```
+
+Executes Cypher query and returns iterator of results.
+
+#### is\_active
+
+```python
+def is_active() -> bool
+```
+
+Returns True if connection is active and can be used.
+

docs/reference/gqlalchemy/disk_storage.md

@@ -14,47 +14,53 @@ An abstract class for implementing on-disk storage features with specific databa
 #### save\_node\_property
 
 ```python
-def save_node_property(node_id: int, property_name: str, property_value: str) -> None
+def save_node_property(node_id: int, property_name: str,
+                       property_value: str) -> None
 ```
 
 Saves a node property to an on disk database.
 
 #### load\_node\_property
 
 ```python
-def load_node_property(node_id: int, property_name: str, property_value: str) -> Optional[str]
+def load_node_property(node_id: int, property_name: str,
+                       property_value: str) -> Optional[str]
 ```
 
 Loads a node property from an on disk database.
 
 #### delete\_node\_property
 
 ```python
-def delete_node_property(node_id: int, property_name: str, property_value: str) -> None
+def delete_node_property(node_id: int, property_name: str,
+                         property_value: str) -> None
 ```
 
 Deletes a node property from an on disk database.
 
 #### save\_relationship\_property
 
 ```python
-def save_relationship_property(relationship_id: int, property_name: str, property_value: str) -> None
+def save_relationship_property(relationship_id: int, property_name: str,
+                               property_value: str) -> None
 ```
 
 Saves a relationship property to an on disk database.
 
 #### load\_relationship\_property
 
 ```python
-def load_relationship_property(relationship_id: int, property_name: str, property_value: str) -> Optional[str]
+def load_relationship_property(relationship_id: int, property_name: str,
+                               property_value: str) -> Optional[str]
 ```
 
 Loads a relationship property from an on disk database.
 
 #### delete\_relationship\_property
 
 ```python
-def delete_relationship_property(node_id: int, property_name: str, property_value: str) -> None
+def delete_relationship_property(node_id: int, property_name: str,
+                                 property_value: str) -> None
 ```
 
 Deletes a node property from an on disk database.
@@ -101,7 +107,8 @@ Deletes all properties in the database.
 #### save\_node\_property
 
 ```python
-def save_node_property(node_id: int, property_name: str, property_value: str) -> None
+def save_node_property(node_id: int, property_name: str,
+                       property_value: str) -> None
 ```
 
 Saves a node property to an on disk database.
@@ -146,7 +153,8 @@ Deletes a node property from an on disk database.
 #### save\_relationship\_property
 
 ```python
-def save_relationship_property(relationship_id: int, property_name: str, property_value: str) -> None
+def save_relationship_property(relationship_id: int, property_name: str,
+                               property_value: str) -> None
 ```
 
 Saves a relationship property to an on disk database.
@@ -160,7 +168,8 @@ Saves a relationship property to an on disk database.
 #### load\_relationship\_property
 
 ```python
-def load_relationship_property(relationship_id: int, property_name: str) -> Optional[str]
+def load_relationship_property(relationship_id: int,
+                               property_name: str) -> Optional[str]
 ```
 
 Loads a relationship property from an on disk database.
@@ -178,7 +187,8 @@ Loads a relationship property from an on disk database.
 #### delete\_relationship\_property
 
 ```python
-def delete_relationship_property(relationship_id: int, property_name: str) -> None
+def delete_relationship_property(relationship_id: int,
+                                 property_name: str) -> None
 ```
 
 Deletes a node property from an on disk database.

docs/reference/gqlalchemy/exceptions.md

@@ -0,0 +1,29 @@
+---
+sidebar_label: exceptions
+title: gqlalchemy.exceptions
+---
+
+#### connection\_handler
+
+```python
+def connection_handler(func,
+                       delay: float = 0.01,
+                       timeout: float = 5.0,
+                       backoff: int = 2)
+```
+
+Wrapper for a wait on the connection.
+
+**Arguments**:
+
+- `func` - A function that tries to create the connection
+- `delay` - A float that defines how long to wait between retries.
+- `timeout` - A float that defines how long to wait for the port.
+- `backoff` - An integer used for multiplying the delay.
+  
+
+**Raises**:
+
+- `GQLAlchemyWaitForConnectionError` - Raises an error
+  after the timeout period has passed.
+

docs/reference/gqlalchemy/graph_algorithms/integrated_algorithms.md

@@ -63,15 +63,17 @@ lambda.
 #### \_\_init\_\_
 
 ```python
-def __init__(lower_bound: int = None, upper_bound: int = None, condition: str = None) -> None
+def __init__(lower_bound: int = None,
+             upper_bound: int = None,
+             condition: str = None) -> None
 ```
 
 **Arguments**:
 
-- `lower_bound` - Lower bound for path depth. Defaults to `None`.
-- `upper_bound` - Upper bound for path depth. Defaults to `None`.
+- `lower_bound` - Lower bound for path depth.
+- `upper_bound` - Upper bound for path depth.
 - `condition` - Filter through nodes and relationships that pass this
-  condition. Defaults to `None`.
+  condition.
 
 #### \_\_str\_\_
 
@@ -107,15 +109,17 @@ lambda.
 #### \_\_init\_\_
 
 ```python
-def __init__(lower_bound: int = None, upper_bound: int = None, condition: str = None) -> None
+def __init__(lower_bound: int = None,
+             upper_bound: int = None,
+             condition: str = None) -> None
 ```
 
 **Arguments**:
 
-- `lower_bound` - Lower bound for path depth. Defaults to None.
-- `upper_bound` - Upper bound for path depth. Defaults to None.
+- `lower_bound` - Lower bound for path depth.
+- `upper_bound` - Upper bound for path depth.
 - `condition` - Filter through nodes and relationships that pass this
-  condition. Defaults to None.
+  condition.
 
 #### \_\_str\_\_
 
@@ -139,7 +143,8 @@ If bounds are specified, returns them in grammar-defined form.
 class WeightedShortestPath(IntegratedAlgorithm)
 ```
 
-Build a Djikstra shortest path call for a Cypher query
+Build a Djikstra shortest path call for a Cypher query.
+
 The weighted shortest path algorithm can be called in Memgraph with Cypher
 queries such as:
 " MATCH (a {id: 723})-[r *WSHORTEST 10 (r, n | r.weight) weight_sum
@@ -151,16 +156,52 @@ is a filter lambda, used to filter which relationships and nodes to use.
 #### \_\_init\_\_
 
 ```python
-def __init__(upper_bound: int = None, condition: str = None, total_weight_var: str = DEFAULT_TOTAL_WEIGHT, weight_property: str = DEFAULT_WEIGHT_PROPERTY) -> None
+def __init__(upper_bound: int = None,
+             condition: str = None,
+             total_weight_var: str = DEFAULT_TOTAL_WEIGHT,
+             weight_property: str = DEFAULT_WEIGHT_PROPERTY) -> None
+```
+
+**Arguments**:
+
+- `upper_bound` - Upper bound for path depth.
+- `condition` - Filter through nodes and relationships that pass this
+  condition.
+- `total_weight_var` - Variable defined as the sum of all weights on
+  path being returned.
+- `weight_property` - property being used as weight.
+
+## AllShortestPath Objects
+
+```python
+class AllShortestPath(IntegratedAlgorithm)
+```
+
+Build a Djikstra shortest path call for a Cypher query.
+
+The weighted shortest path algorithm can be called in Memgraph with Cypher
+queries such as:
+" MATCH (a {id: 723})-[r *ALLSHORTEST 10 (r, n | r.weight) total_weight
+        (r, n | r.x > 12 AND r.y < 3)]-(b {id: 882}) RETURN * "
+It is called inside the relationship clause, "*ALLSHORTEST" naming the
+algorithm, "10" specifying search depth bounds, and "(r, n | <expression>)"
+is a filter lambda, used to filter which relationships and nodes to use.
+
+#### \_\_init\_\_
+
+```python
+def __init__(upper_bound: int = None,
+             condition: str = None,
+             total_weight_var: str = DEFAULT_TOTAL_WEIGHT,
+             weight_property: str = DEFAULT_WEIGHT_PROPERTY) -> None
 ```
 
 **Arguments**:
 
-- `upper_bound` - Upper bound for path depth. Defaults to None.
+- `upper_bound` - Upper bound for path depth.
 - `condition` - Filter through nodes and relationships that pass this
-  condition. Defaults to None.
+  condition.
 - `total_weight_var` - Variable defined as the sum of all weights on
-  path being returned. Defaults to "total_weight".
-- `weight_property` - property being used as weight. Defaults to
-  "r.weight".
+  path being returned.
+- `weight_property` - Property being used as weight.
 

docs/reference/gqlalchemy/graph_algorithms/query_modules.md

@@ -43,7 +43,8 @@ method.
 #### parse\_query\_module\_signature
 
 ```python
-def parse_query_module_signature(signature: str) -> Tuple[List[Dict[str, str]], List[Dict[str, str]]]
+def parse_query_module_signature(
+        signature: str) -> Tuple[List[Dict[str, str]], List[Dict[str, str]]]
 ```
 
 Query Modules signatures received from Memgraph are parsed into a
@@ -67,7 +68,11 @@ type of argument and "default" where default argument value is given
 #### parse\_field
 
 ```python
-def parse_field(vars_field: str, name_type_delimiter: str = NAME_TYPE_DELIMITIER, default_value_delimiter: str = EQUALS_DELIMITER) -> List[Dict[str, str]]
+def parse_field(
+        vars_field: str,
+        name_type_delimiter: str = NAME_TYPE_DELIMITIER,
+        default_value_delimiter: str = EQUALS_DELIMITER
+) -> List[Dict[str, str]]
 ```
 
 Parse a field of arguments or returns from Query Module signature.