Fix schema IDs to use https://w3id.org/valuesets

Change all schema id: fields from https://w3id.org/linkml/valuesets
to https://w3id.org/valuesets to match the registered w3id prefix.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

Author: dragon-ai-agent

docs/schema/valuesets.yaml

@@ -10531,7 +10531,7 @@
             "type": "string"
         }
     },
-    "$id": "https://w3id.org/linkml/valuesets",
+    "$id": "https://w3id.org/valuesets",
     "$schema": "https://json-schema.org/draft/2019-09/schema",
     "additionalProperties": true,
     "metamodel_version": "1.7.0",

docs/slides/valuesets-slides.pdf

@@ -52,7 +52,7 @@ def __contains__(self, key: str) -> bool:
         return key in self.root
 
 
-linkml_meta = LinkMLMeta({'default_prefix': 'valuesets', 'description': 'A collection of commonly used value sets', 'id': 'https://w3id.org/linkml/valuesets', 'name': 'valuesets', 'title': 'valuesets'})
+linkml_meta = LinkMLMeta({'default_prefix': 'valuesets', 'description': 'A collection of commonly used value sets', 'id': 'https://w3id.org/valuesets', 'name': 'valuesets', 'title': 'valuesets'})
 
 class RelativeTimeEnum(RichEnum):
     """

docs/slides/valuesets-slides.pptx

@@ -52,7 +52,7 @@ def __contains__(self, key: str) -> bool:
         return key in self.root
 
 
-linkml_meta = LinkMLMeta({'default_prefix': 'valuesets', 'description': 'A collection of commonly used value sets', 'id': 'https://w3id.org/linkml/valuesets', 'name': 'valuesets', 'title': 'valuesets'})
+linkml_meta = LinkMLMeta({'default_prefix': 'valuesets', 'description': 'A collection of commonly used value sets', 'id': 'https://w3id.org/valuesets', 'name': 'valuesets', 'title': 'valuesets'})
 
 class RelativeTimeEnum(RichEnum):
     """

project/jsonschema/valuesets.schema.json

@@ -14,7 +14,7 @@ description: |
   - ROR API: https://api.ror.org/organizations
 
   ROR IDs should be used in the `meaning` field with the full URL format (e.g., https://ror.org/05gvnxz63).
-id: https://w3id.org/linkml/valuesets/academic/organizations
+id: https://w3id.org/valuesets/academic/organizations
 imports:
 - linkml:types
 prefixes:

src/valuesets/datamodel/valuesets.py

@@ -1,7 +1,7 @@
 name: research
 title: Academic and Research Value Sets
 description: Value sets for academic publishing, research, and scholarly communication
-id: https://w3id.org/linkml/valuesets/academic/research
+id: https://w3id.org/valuesets/academic/research
 imports:
 - linkml:types
 prefixes:

src/valuesets/datamodel/valuesets_pydantic.py

@@ -7,7 +7,7 @@ description: 'Value sets for biosynthetic gene cluster (BGC) categories used in
   BGCs.
 
   Based on the MIBiG (Minimum Information about a Biosynthetic Gene cluster) standard.'
-id: https://w3id.org/linkml/valuesets/bio/bgc_categories
+id: https://w3id.org/valuesets/bio/bgc_categories
 imports:
 - linkml:types
 prefixes:

src/valuesets/schema/academic/organizations.yaml

@@ -5,7 +5,7 @@ description: 'Dynamic enumerations for biological entities including anatomical
   cell types, diseases, and chemical entities. These enums are populated
 
   dynamically from ontologies.'
-id: https://w3id.org/linkml/valuesets/bio/bio_entities
+id: https://w3id.org/valuesets/bio/bio_entities
 imports:
 - linkml:types
 prefixes: