bluegenes/.circleci/config.yml at 7c5f76dba687dddf15bf699513b1c1025739ec41 · intermine/bluegenes · GitHub

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version: 2.1
executors:
  bluegenes_exec:
    docker:
    - image: 'circleci/clojure:openjdk-8-lein-2.9.1-node-browsers'
  intermine_exec:
    machine:
      image: ubuntu-2004:2024.11.1
    environment:
      BLUEGENES_DEFAULT_SERVICE_ROOT: "http://localhost:9999/biotestmine"
      BLUEGENES_DEFAULT_MINE_NAME: Biotestmine
      BLUEGENES_DEFAULT_NAMESPACE: biotestmine
      BLUEGENES_ADDITIONAL_MINES: '[{:root "https://www.flymine.org/flymine" :name "FlyMine" :namespace "flymine"}]'
      CYPRESS_defaultCommandTimeout: 60000
      CYPRESS_requestTimeout: 60000
      CYPRESS_responseTimeout: 60000
## I wasn't able to get kaocha to connect to the browser when using the machine
## executor (needed for the browser tests) and you can't use intermine_boot
## (needed for Cypress tests) inside a docker executor, due to them using a
## remote docker daemon. Hence the need for two executors.
jobs:
  setup_bluegenes:
    executor: bluegenes_exec
    steps:
    - run:
        name: Start a browser process for running kaocha tests
        command: google-chrome-stable --no-first-run
        background: true
    - checkout
    - restore_cache:
        keys:
        - v1-deps-{{ .Branch }}-{{ checksum "package.json" }}
        - v1-deps--kaocha-{{ .Branch }}-{{ checksum "project.clj" }}
        - v1-deps-{{ .Branch }}
        - v1-deps
    - run: lein cljfmt check
    - run: npm ci
    - save_cache:
        key: v1-deps-{{ .Branch }}-{{ checksum "package.json" }}
        paths:
        - ~/.npm
        - ~/.cache
    - run: lein kaocha
    - save_cache:
        key: v1-deps-kaocha-{{ .Branch }}-{{ checksum "project.clj" }}
        paths:
        - ~/.m2
  setup_intermine:
    executor: intermine_exec
    resource_class: large
    steps:
    - run: sudo apt-get update -y
    - run: sudo apt-get install -y libgconf-2-4
    - run: pyenv versions
    - run: pyenv global 3.8.5
    - run: pip3 install intermine-boot
    - restore_cache:
        keys:
        - biotestmine-e756d26
    - run: intermine_boot start local
    - save_cache:
        key: biotestmine-e756d26
        paths:
        - ~/.local/share/intermine_boot
    - checkout
    - restore_cache:
        keys:
        - v1-deps-{{ .Branch }}-{{ checksum "package.json" }}
        - v1-deps-{{ .Branch }}-{{ checksum "project.clj" }}
        - v1-deps-{{ .Branch }}
        - v1-deps
    - run: npm ci
    - run: node -v
    - run: npx cypress verify
    - save_cache:
        key: v1-deps-{{ .Branch }}-{{ checksum "package.json" }}
        paths:
        - ~/.npm
        - ~/.cache
    - run: lein deps
    - run:
        command: lein prod
        background: true
    - save_cache:
        key: v1-deps-{{ .Branch }}-{{ checksum "project.clj" }}
        paths:
        - ~/.m2
    - run:
        name: Wait until web server is ready
        command: |
          until $(curl --output /dev/null --silent --head --fail http://localhost:5000); do
              sleep 10
          done
    - run: npm test
    - store_test_results:
        path: cypress/results
    - store_artifacts:
        path: cypress/videos
    - store_artifacts:
        path: cypress/screenshots
workflows:
  build_and_test:
    jobs:
    - setup_bluegenes
    - setup_intermine