tests.yml

name: Tests

on:
  push:
    branches: [main]
    paths:
      - 'python/**'
      - 'R/R/**'
      - 'R/tests/**'
      - '.github/workflows/tests.yml'
  pull_request:
    branches: [main]
    paths:
      - 'python/**'
      - 'R/R/**'
      - 'R/tests/**'
  workflow_dispatch:

jobs:
  test:
    runs-on: ubuntu-latest
    steps:
    - uses: actions/checkout@v4

    - name: Set up Python 3.11
      uses: actions/setup-python@v5
      with:
        python-version: '3.11'
        cache: 'pip'

    - name: Install dependencies
      run: |
        python -m pip install --upgrade pip
        python -m pip install pytest pytest-cov ruff
        cd python
        pip install -e .[dev]

    - name: Lint
      run: |
        cd python
        ruff check mllmcelltype tests

    - name: Test
      env:
        OPENAI_API_KEY: ${{ secrets.OPENAI_API_KEY }}
        ANTHROPIC_API_KEY: ${{ secrets.ANTHROPIC_API_KEY }}
        GEMINI_API_KEY: ${{ secrets.GEMINI_API_KEY }}
        DEEPSEEK_API_KEY: ${{ secrets.DEEPSEEK_API_KEY }}
        QWEN_API_KEY: ${{ secrets.QWEN_API_KEY }}
        STEPFUN_API_KEY: ${{ secrets.STEPFUN_API_KEY }}
        ZHIPU_API_KEY: ${{ secrets.ZHIPU_API_KEY }}
        MINIMAX_API_KEY: ${{ secrets.MINIMAX_API_KEY }}
      run: |
        cd python
        pytest --cov=mllmcelltype tests/